Items where Author is "Gatherer, Derek"

Journal Article

Soe, Baby Kyi and Kaewmee, Saowalak and Mano, Chonlada and Pattanawong, Urassaya and Tipparawong, Nopporn and Siriyasatien, Padet and Gatherer, Derek and Urbaniak, Mick and Bates, Paul and Jariyapan, Narissara (2025) Molecular detection of parasites and host preference in wild-caught Culicoides biting midges (Diptera: Ceratopogonidae) in Chiang Mai and Nakhon Si Thammarat Provinces, Thailand. Parasite, 32 (2): 2. ISSN 1252-607X

Hardaker, Claire and Deignan, Alice and Semino, Elena and Coltman-Patel, Tara and Dance, William and Demjen, Zsofia and Sanderson, Chris and Gatherer, Derek (2024) The Victorian Anti-Vaccination Discourse Corpus (VicVaDis) : construction and exploration. Digital Scholarship in the Humanities, 39 (1). pp. 162-174. ISSN 2055-7671

Gatherer, Derek (2024) Some Adults May Need a Measles Booster : Measles is extremely infectious. Vaccines provide good protection, but some adults may need a top-up shot. Scientific American. ISSN 0036-8733

Gatherer, Derek (2023) Review of: "The Cooperative Neuron: Cellular Foundations of Mental Life." William A. Phillips. Oxford: Oxford University Press. Zygon, 58 (3). pp. 806-807. ISSN 0591-2385

Shaw, Brandon and Gatherer, Derek (2023) Candidate historical events for the emergence of Human Coronavirus OC43 : A critical reassessment of the molecular evidence. PLoS One, 18 (5): e0285481. ISSN 1932-6203

Almutairi, Hatim and Urbaniak, Michael D and Bates, Michelle D and Kwakye-Nuako, Godwin and Al-Salem, Waleed S and Dillon, Rod J and Bates, Paul A and Gatherer, Derek (2023) Chromosome-Scale Assembly of the Complete Genome Sequence of Leishmania (Mundinia) procaviensis Isolate 253, Strain LV425. Microbiology Resource Announcements, 12 (4): e0130622. ISSN 2576-098X

Gatherer, Derek (2023) Discourses on the “English Sweat” in the Early English Books Online Corpus. Preprints. ISSN 2310-287X

Coltman-Patel, Tara and Dance, William and Demjén, Zsófia and Hardaker, Claire and Gatherer, Derek and Semino, Elena (2022) ‘Am I being unreasonable to vaccinate my kids against my ex’s wishes?’ : A Corpus Linguistic Exploration of Conflict in Vaccination Discussions on Mumsnet Talk’s AIBU Forum. Discourse, Context and Media, 48: 100624. ISSN 2211-6958

de Araújo Barbosa, Vanessa and de Souza, Cristian F and Pereira, Alisson and Gatherer, Derek and Brazil, Reginaldo P and Bray, Daniel P and Hamilton, James G C (2021) Insecticide-impregnated netting : A surface treatment for killing Lutzomyia longipalpis (Diptera: Psychodidae), the vector of Leishmania infantum. Current Research in Parasitology & Vector-Borne Diseases, 1: 100044. ISSN 2667-114X

Gatherer, Derek and Depledge, Daniel P and Hartley, Carol and Szpara, Moriah L and Vaz, Paola and Benko, Maria and Brandt, Curtis and Bryant, Neil and Dastjerdi, Akbar and Doszpoly, Andor and Gompels, Ursula and Inoue, Naoki and Jarosinski, Keith and Kaul, Rajeev and Lacoste, Vincent and Norberg, Peter and Origgi, Francesco and Orton, Richard and Pellett, Philip and Schmid, Scott and Spatz, Stephen and Stewart, James P and Trimpert, Jakob and Waltzek, Thomas B and Davison, Andrew J. (2021) Herpesviridae. Journal of General Virology, 102 (10). ISSN 0022-1317

Gatherer, Derek and Depledge, Daniel P and Hartley, Carol A and Szpara, Moriah L and Vaz, Paola K and Benkő, Mária and Brandt, Curtis R and Bryant, Neil A and Dastjerdi, Akbar and Doszpoly, Andor and Gompels, Ursula A and Inoue, Naoki and Jarosinski, Keith W and Kaul, Rajeev and Lacoste, Vincent and Norberg, Peter and Origgi, Francesco C and Orton, Richard J and Pellett, Philip E and Schmid, D Scott and Spatz, Stephen J and Stewart, James P and Trimpert, Jakob and Waltzek, Thomas B and Davison, Andrew J (2021) ICTV Virus Taxonomy Profile : Herpesviridae 2021. Journal of General Virology, 102 (10). ISSN 0022-1317

Almutairi, Hatim and Urbaniak, Michael D and Bates, Michelle D and Al-Salem, Waleed S and Dillon, Rod J and Bates, Paul A and Gatherer, Derek (2021) Chromosome-Scale Assembly of the Complete Genome Sequence of Porcisia hertigi, Isolate C119, Strain LV43. Microbiology Resource Announcements, 10 (41): e0065121. ISSN 2576-098X

Almutairi, Hatim and Urbaniak, Michael D and Bates, Michelle D and Kwakye-Nuako, Godwin and Al-Salem, Waleed S and Dillon, Rod J and Bates, Paul A and Gatherer, Derek (2021) Chromosome-Scale Assembly of the Complete Genome Sequence of Leishmania (Mundinia) sp. Ghana, Isolate GH5, Strain LV757. Microbiology Resource Announcements, 10 (39): e0059121. ISSN 2576-098X

Almutairi, Hatim and Urbaniak, Michael D and Bates, Michelle D and Thomaz-Soccol, Vanete and Al-Salem, Waleed S and Dillon, Rod J and Bates, Paul A and Gatherer, Derek (2021) Chromosome-Scale Assembly of the Complete Genome Sequence of Leishmania (Mundinia) enriettii, Isolate CUR178, Strain LV763. Microbiology Resource Announcements, 10 (36): e0057521. ISSN 2576-098X

Almutairi, Hatim and Urbaniak, Michael D and Bates, Michelle D and Jariyapan, Narissara and Al-Salem, Waleed S and Dillon, Rod J and Bates, Paul A and Gatherer, Derek (2021) Chromosome-Scale Assembly of the Complete Genome Sequence of Leishmania (Mundinia) orientalis, Isolate LSCM4, Strain LV768. Microbiology Resource Announcements, 10 (36): e0057421. ISSN 2576-098X

Almutairi, Hatim and Urbaniak, Michael D and Bates, Michelle D and Jariyapan, Narissara and Kwakye-Nuako, Godwin and Thomaz Soccol, Vanete and Al-Salem, Waleed S and Dillon, Rod J and Bates, Paul A and Gatherer, Derek (2021) Chromosome-scale genome sequencing, assembly and annotation of six genomes from subfamily Leishmaniinae. Scientific Data, 8 (1): 234. ISSN 2052-4463

Almutairi, Hatim and Urbaniak, Michael D and Bates, Michelle D and Jariyapan, Narissara and Kwakye-Nuako, Godwin and Thomaz-Soccol, Vanete and Al-Salem, Waleed S and Dillon, Rod J and Bates, Paul A and Gatherer, Derek (2021) LGAAP : Leishmaniinae Genome Assembly and Annotation Pipeline. Microbiology Resource Announcements, 10 (29): e0043921. ISSN 2576-098X

Almutairi, Hatim and Urbaniak, Michael D and Bates, Michelle D and Jariyapan, Narissara and Al-Salem, Waleed S and Dillon, Rod J and Bates, Paul A and Gatherer, Derek (2021) Chromosome-Scale Assembly of the Complete Genome Sequence of Leishmania (Mundinia) martiniquensis, Isolate LSCM1, Strain LV760. Microbiology Resource Announcements, 10 (24): e0005821. ISSN 2576-098X

Lai, Wai-Ling and Chew, Jactty and Gatherer, Derek and Ngoprasert, Dusit and Rahman, Sadequr and Ayub, Qasim and Kannan, Adrian and Vaughan, Eleanor and Wong, Siew Te and Kulaimi, Noor Azleen Mohd and Ratnayeke, Shyamala (2021) Mitochondrial DNA profiling reveals two lineages of sun bears in East and West Malaysia. The Journal of heredity, 112 (2). 214–220. ISSN 0022-1503

Solovejute, Rosita and Gatherer, Derek (2021) Hunting for Previous Coronavirus Pandemics Using Corpus Linguistic Analysis of 19th Century British Newspapers. Preprints. ISSN 2310-287X

Caddy, Sarah L and Moore, Anne and Bamford, Connor and Hunter, David and Gatherer, Derek and West, Robert and Michie, Susan (2020) A million deaths from coronavirus: seven experts consider key questions. The Conversation.

Cochrane, Louis J. and Gatherer, Derek (2020) Dynamic Programming Algorithms Applied to Musical Counterpoint in Process Composition : An Example Using Henri Pousseur’s Scambi. Preprints. ISSN 2310-287X

Bishop, Lisa and Müllner, M. and Bjurhult-Kennedy, Amalie and Lauder, Bob and Gatherer, Derek (2020) Immunological cross-reactions with paramyxovirus nucleoproteins may explain sporadic apparent ebolavirus seropositivity in European populations. Biorxiv.

Gatherer, Derek (2020) Reflections on integrating bioinformatics into the undergraduate curriculum : The Lancaster experience. Biochemistry and molecular biology education : a bimonthly publication of the International Union of Biochemistry and Molecular Biology, 48 (2). pp. 118-127. ISSN 1470-8175

Gatherer, Derek (2020) Scambi fushi tarazu : A Musical Representation of a Drosophila Gene Expression Pattern. Preprints. ISSN 2310-287X

Mead, Dylan J T and Lunagomez, Simón and Gatherer, Derek (2019) Visualization of protein sequence space with force-directed graphs, and their application to the choice of target-template pairs for homology modelling. Journal of Molecular Graphics and Modelling, 92. pp. 180-191. ISSN 1093-3263

Roberts, Ryan and Yee, Pinn Tsin Isabel and Mujawar, Shama and Lahiri, Chandrajit and Poh, Chit Laa and Gatherer, Derek (2019) A decade of sustained selection pressure on two surface sites of the VP1 protein of Enterovirus A71 suggests that immune evasion may be an indirect driver for virulence. Scientific Reports, 9 (1): 5427. ISSN 2045-2322

Cusi, Maria Grazia and Gandolfo, Claudia and Gori Savellini, Gianni and Terrosi, Chiara and Sadler, Rebecca and Gatherer, Derek (2018) Phylodynamic analysis of the historical spread of Toscana virus around the Mediterranean. Biorxiv.

Atkinson, Kate and Bishop, Lisa and Rhodes, Glenn and Salez, Nicolas and McEwan, Neil R and Hegarty, Matthew and Robey, Julie and Harding, Nicola and Wetherell, Simon and Lauder, Robert Macmillan and Pickup, Roger William and Wilkinson, Mark and Gatherer, Derek (2018) Sequence Variation in Multidrug-Resistant Plasmid pLUH01, Isolated from Human Nasopharyngeal Swabs. Microbiology Resource Announcements, 7 (1): e00835-18. pp. 1-2. ISSN 2576-098X

Gatherer, Derek (2018) Ebola returns to its Congo Basin heartland. Journal of General Virology, 99 (7). ISSN 0022-1317

Shah, Preksha and Mistry, Jaymisha and Reche, Pedro A. and Gatherer, Derek and Flower, Darren R. (2018) In silico design of Mycobacterium tuberculosis epitope ensemble vaccines. Molecular Immunology, 97. pp. 56-62. ISSN 0161-5890

Almpanis, Apostolos and Swain, Martin and Gatherer, Derek and McEwan, Neil (2018) Correlation between bacterial G+C content, genome size and the G+C content of associated plasmids and bacteriophages. Microbial Genomics, 2018 (4). ISSN 2057-5858

Ware, Gemma and Gatherer, Derek (2018) Africa’s missing Ebola outbreaks – podcast. The Conversation.

Damfo, Shymaa Abdullah and Reche, Pedro and Gatherer, Derek and Flower, Darren R. (2017) In silico design of knowledge-based Plasmodium falciparum epitope ensemble vaccines. Journal of Molecular Graphics and Modelling, 78. pp. 195-205. ISSN 1093-3263

Gatherer, Derek (2017) What really killed Prince Albert? The Conversation.

Atkinson, Kate V. and Bishop, Lisa A. and Rhodes, Glenn and Salez, Nicolas and McEwan, Neil R. and Hegarty, Matthew J. and Robey, Julie and Harding, Nicola and Wetherell, Simon and Lauder, Robert M. and Pickup, Roger W. and Wilkinson, Mark and Gatherer, Derek (2017) Nasopharyngeal metagenomic deep sequencing data, Lancaster, UK, 2014-2015. Scientific Data, 4: 170161. ISSN 2052-4463

Atkinson, Kate and Bishop, Lisa A and Rhodes, Glenn and Salez, Nicolas and McEwan, Neil R and Hegarty, Matthew J and Robey, Julie and Harding, Nicola and Wetherell, Simon and Lauder, Robert M and Pickup, Roger W and Wilkinson, Mark and Gatherer, Derek (2017) Genome Sequence of Human Papillomavirus Type 20, Strain HPV-20/Lancaster/2015. Genome Announcements, 5 (31). e00712-17. ISSN 2169-8287

Gatherer, Derek (2017) Africa’s missing Ebola outbreaks. The Conversation.

Gatherer, Derek (2017) Emerging viruses - Is there an emerging pattern? Biochemist, 39 (3). pp. 4-7. ISSN 0954-982X

Atkinson, Kate V. and Bishop, Lisa A. and Rhodes, Glenn and Salez, Nicolas and McEwan, Neil R. and Hegarty, Matthew J. and Robey, Julie and Harding, Nicola and Wetherell, Simon and Lauder, Robert M. and Pickup, Roger W. and Wilkinson, Mark and Gatherer, Derek (2017) Genome Sequence of Human Papillomavirus 23 Strain HPV-23/Lancaster/2015. Genome Announcements, 5 (20): e00257-17. ISSN 2169-8287

Atkinson, Kate V. and Bishop, Lisa A. and Rhodes, Glenn and Salez, Nicolas and McEwan, Neil R. and Hegarty, Matthew J. and Robey, Julie and Harding, Nicola and Wetherell, Simon and Lauder, Robert M. and Pickup, Roger W. and Wilkinson, Mark and Gatherer, Derek (2017) Influenza C in Lancaster, UK, in the winter of 2014-2015. Scientific Reports, 7: 46578. ISSN 2045-2322

Atkinson, Kate V. and Bishop, Lisa A. and Rhodes, Glenn and Salez, Nicolas and McEwan, Neil R. and Hegarty, Matthew J. and Robey, Julie and Harding, Nicola and Wetherell, Simon and Lauder, Robert M and Pickup, Roger W. and Wilkinson, Mark and Gatherer, Derek (2017) Genome sequence of human rhinovirus A22, strain Lancaster/2015. Genome Announcements, 5 (12).

Rakus, Krzysztof and Ronsmans, Maygane and Forlenza, Maria and Boutier, Maxime and Piazzon, M. Carla and Jazowiecka-Rakus, Joanna and Gatherer, Derek and Athanasiadis, Alekos and Farnir, Frédéric and Davison, Andrew J. and Boudinot, Pierre and Michiels, Thomas and Wiegertjes, Geert F. and Vanderplasschen, Alain (2017) Conserved fever pathways across vertebrates : a herpesvirus expressed decoy TNF-α receptor delays behavioral fever in fish. Cell Host and Microbe, 21 (2). pp. 244-253. ISSN 1931-3128

Gatherer, Derek (2017) Five little-known diseases to watch out for in 2017. The Conversation.

Formella, Magdalena and Gatherer, Derek (2016) The serology of Ebolavirus - a wider geographical range, a wider genus of viruses, or a wider range of virulence? Journal of General Virology, 97 (12). pp. 3120-3130. ISSN 0022-1317

Gatherer, Derek (2016) Why it’s time for a rethink on flu vaccination. The Conversation.

Palmer, Michael L. and Williams, Richard A and Gatherer, Derek (2016) Rosen's (M,R) system as an X-machine. Journal of Theoretical Biology, 408. pp. 97-104. ISSN 0022-5193

Sheikh, Qamar M. and Gatherer, Derek and Reche, Pedro A. and Flower, Darren R. (2016) Towards the knowledge-based design of universal influenza epitope ensemble vaccines. Bioinformatics, 32 (21). pp. 3233-3239. ISSN 1367-4803

Gatherer, Derek (2016) The voyages of Zika virus. Microbiology Today, 43 (4). pp. 201-202. ISSN 1464-0570

Olabode, Abayomi and Gatherer, Derek and Jiang, Xiaowei and Matthews, David and Hiscox, Julian and Gunther, Stephan and Carroll, Miles and Lovell, Simon and Robertson, David (2016) Identification of important amino acid replacements in the 2013-2016 Ebola virus outbreak. Biorxiv.

Carter, Alice R. and Gatherer, Derek (2016) Tempus et Locus: a tool for extracting precisely dated viral sequences from GenBank, and its application to the phylogenetics of primate erythroparvovirus 1 (B19V). Biorxiv, 2016.

Gatherer, Derek (2016) Should Zika really stop you going to the Rio Olympics? Here are the facts. The Conversation.

Bowen, Christopher D. and Renner, Daniel W. and Shreve, Jacob T. and Tafuri, Yolanda and Payne, Kimberly M. and Dix, Richard D. and Kinchington, Paul R. and Gatherer, Derek and Szpara, Moriah L. (2016) Viral forensic genomics reveals the relatedness of classic herpes simplex virus strains KOS, KOS63, and KOS79. Virology, 492. pp. 179-186. ISSN 0042-6822

Gatherer, Derek and Kohl, Alain (2016) Zika virus : a previously slow pandemic spreads rapidly through the Americas. Journal of General Virology, 97 (2). pp. 269-273. ISSN 0022-1317

Aguiar, Eric Roberto Guimarães Rocha and Olmo, Roenick Proveti and Paro, Simona and Ferreira, Flavia Viana and de Faria, Isaque João da Silva and Todjro, Yaovi Mathias Honore and Lobo, Francisco Pereira and Kroon, Erna Geessien and Meignin, Carine and Gatherer, Derek and Imler, Jean-Luc and Marques, João Trindade (2016) Erratum: Sequence-independent characterization of viruses based on the pattern of viral small RNAs produced by the host (Nucleic Acids Research (2016) 43:13 (6191-6206) (DOI:10.1093/nar/gkv587)). Nucleic Acids Research, 44 (7). pp. 3477-3478. ISSN 0305-1048

Gatherer, Derek (2016) Zika: a rare benign virus suddenly turns nasty, and heads for the US. The Conversation.

Zhang, Ling and Williams, Richard and Gatherer, Derek (2016) Rosen's (M,R) system in Unified Modelling Language. BioSystems, 139. pp. 29-36. ISSN 0303-2647

Gatherer, Derek (2015) And now for the flu forecast …. The Conversation.

Gandar, Frédéric and Wilkie, Gavin S. and Gatherer, Derek and Kerr, Karen and Marlier, Didier and Diez, Marianne and Marschang, Rachel E. and Mast, Jan and Dewals, Benjamin G. and Davison, Andrew J. and Vanderplasschen, Alain F. C. (2015) The genome of a tortoise herpesvirus (testudinid herpesvirus 3) has a novel structure and contains a large region that is not required for replication in vitro or virulence in vivo. Journal of Virology, 89 (22). pp. 11438-11456. ISSN 0022-538X

Gatherer, Derek (2015) Explainer: what is freshers’ flu and what can you do about it? The Conversation.

Robinson, Mark W. and Aranday-Cortes, Elihu and Gatherer, Derek and Swann, Rachael and Liefhebber, Jolanda M. P. and Filipe, Ana Da Silva and Sigruener, Alex and Barclay, Stephen T. and Mills, Peter R. and Patel, Arvind H. and McLauchlan, John (2015) Viral genotype correlates with distinct liver gene transcription signatures in chronic hepatitis C virus infection. Liver International, 35 (10). pp. 2256-2264. ISSN 1478-3223

Aguiar, Eric Roberto Guimarães Rocha and Olmo, Roenick Proveti and Paro, Simona and Ferreira, Flavia Viana and de Faria, Isaque João da Silva and Todjro, Yaovi Mathias Honore and Lobo, Francisco Pereira and Kroon, Erna Geessien and Meignin, Carine and Gatherer, Derek and Imler, Jean-Luc and Marques, João Trindade (2015) Sequence-independent characterization of viruses based on the pattern of viral small RNAs produced by the host. Nucleic Acids Research, 43 (13). 6191–6206. ISSN 0305-1048

Gatherer, Derek (2015) What was sweating sickness – the mysterious Tudor plague of Wolf Hall? The Conversation.

Gatherer, Derek (2015) Five things you need to know about bird flu. The Conversation.

McGonigle, Richard and Yap, Wei Boon and Ong, Swee Tin and Gatherer, Derek and Bakker, Saskia E and Tan, Wen Siang and Bhella, David (2015) An N-terminal extension to the hepatitis B virus core protein forms a poorly ordered trimeric spike in assembled virus-like particles. Journal of Structural Biology, 189 (2). pp. 73-80. ISSN 1095-8657

Gatherer, Derek (2015) The unprecedented scale of the West African Ebola virus disease outbreak is due to environmental and sociological factors, not special attributes of the currently circulating strain of the virus. Evidence Based Medicine, 20 (1). p. 28. ISSN 1356-5524

Gatherer, Derek (2014) Ebola vaccines were always in the pipeline – now we’re starting to see the results. The Conversation.

Gatherer, Derek (2014) Five common misconceptions about seasonal flu. The Conversation.

Hussain, Mushtaq and Gatherer, Derek and Wilson, Joanna B. (2014) Modelling the structure of full-length Epstein-Barr virus nuclear antigen 1. Virus Genes, 49 (3). pp. 358-372. ISSN 0920-8569

Gatherer, Derek (2014) The 2014 Ebola virus disease outbreak in West Africa. Journal of General Virology, 95 (8). pp. 1619-1624. ISSN 0022-1317

Keck, Zhen-Yong and Angus, Allan G. N. and Wang, Wenyan and Lau, Patrick and Wang, Yong and Gatherer, Derek and Patel, Arvind H. and Foung, Steven K. H. (2014) Non-random escape pathways from a broadly neutralizing human monoclonal antibody map to a highly conserved region on the hepatitis C virus E2 glycoprotein encompassing amino acids 412-423. PLoS Pathogens, 10 (8): e1004297. ISSN 1553-7374

Gatherer, Derek (2014) How Ebola could head out of Africa – a tale of two travellers. The Conversation.

Gatherer, Derek (2014) What happens to your body if you get Ebola? The Conversation.

Cotmore, Susan F. and Agbandje-McKenna, Mavis and Chiorini, John A. and Mukha, Dmitry V. and Pintel, David J. and Qiu, Jianming and Soderlund-Venermo, Maria and Tattersall, Peter and Tijssen, Peter and Gatherer, Derek and Davison, Andrew J. (2014) The family Parvoviridae. Archives of Virology, 159 (5). pp. 1239-1247. ISSN 0304-8608

Rima, Bert K. and Gatherer, Derek and Young, Daniel F. and Norsted, Hannah and Randall, Richard E. and Davison, Andrew J. (2014) Stability of the parainfluenza virus 5 genome revealed by deep sequencing of strains isolated from different hosts and following passage in cell culture. Journal of Virology, 88 (7). pp. 3826-3836. ISSN 0022-538X

Ouyang, Ping and Rakus, Krzysztof and van Beurden, Steven and Westphal, Adrie and Davison, Andrew and Gatherer, Derek and Vanderplasschen, Alain (2014) Interleukin-10s encoded by viruses : a remarkable example of independent acquisitions of a cellular gene by viruses and its subsequent evolution in the viral genome. Journal of General Virology, 95 (2). pp. 245-262. ISSN 0022-1317

Szpara, Moriah L. and Gatherer, Derek and Ochoa, Alejandro and Greenbaum, Benjamin and Dolan, Aidan and Bowden, Rory J. and Enquist, Lynn W. and Legendre, Matthieu and Davison, Andrew J. (2014) Evolution and diversity in human herpes simplex virus genomes. Journal of Virology, 88 (2). pp. 1209-1227. ISSN 0022-538X

Gatherer, Derek and Galpin, Vashti (2013) Rosen's (M,R) system in process algebra. BMC Systems Biology, 7 (1): 128. ISSN 1752-0509

Killip, M. J. and Young, D. F. and Gatherer, Derek and Ross, C. S. and Short, J. A. L. and Davison, A. J. and Goodbourn, S. and Randall, R. E. (2013) Deep sequencing analysis of defective genomes of parainfluenza virus 5 and their role in interferon induction. Journal of Virology, 87 (9). pp. 4798-4807. ISSN 0022-538X

Davison, Andrew J. and Kurobe, Tomofumi and Gatherer, Derek and Cunningham, Charles and Korf, Ian and Fukuda, Hideo and Hedrick, Ronald P and Waltzek, Thomas B (2013) Comparative genomics of carp herpesviruses. Journal of Virology, 87 (5). pp. 2908-2922. ISSN 0022-538X

van Beurden, Steven J. and Gatherer, Derek and Kerr, Karen and Galbraith, Julie and Herzyk, Pawel and Peeters, Ben P. H. and Engelsma, Marc Y. and Rottier, Peter J. M. and Davison, Andrew J. (2012) Anguillid herpesvirus 1 transcriptome. Journal of Virology, 86 (18). pp. 10150-10161. ISSN 0022-538X

Robinson, M. and Domingues, P. and Gatherer, Derek and Mills, P. and Patel, A. and McLauchlan, J. (2012) Identification of genes that are differentially regulated during chronic hepatitis C virus infection of the liver using RNA-Seq. Immunology, 137 (Suppl.). p. 117. ISSN 0019-2805

Vanni, Emilia and Gatherer, Derek and Tong, Lily and Everett, Roger D. and Boutell, Chris (2012) Functional characterization of residues required for the herpes simplex virus 1 E3 ubiquitin ligase ICP0 to interact with the cellular E2 ubiquitin-conjugating enzyme UBE2D1 (UbcH5a). Journal of Virology, 86 (11). pp. 6323-6333. ISSN 0022-538X

Angus, Allan G. N. and Loquet, Antoine and Stack, Séamus J. and Dalrymple, David and Gatherer, Derek and Penin, François and Patel, Arvind H. (2012) Conserved glycine 33 residue in flexible domain I of hepatitis C virus core protein is critical for virus infectivity. Journal of Virology, 86 (2). pp. 679-690. ISSN 0022-538X

Horst, Daniëlle and Burrows, Scott R. and Gatherer, Derek and van Wilgenburg, Bonnie and Boer, Ingrid G. J. and Bell, Melissa J. and Ressing, Maaike E. and Wiertz, Emmanuel J. H. J. (2012) Epstein-Barr virus isolates retain their capacity to evade T cell immunity through BNLF2a despite extensive sequence variation. Journal of Virology, 86 (1). pp. 572-577. ISSN 0022-538X

Gatherer, Derek and Seirafian, Sepehr and Cunningham, Charles and Holton, Mary and Dargan, Derrick J. and Baluchova, Katarina and Hector, Ralph D. and Galbraith, Julie and Herzyk, Pawel and Wilkinson, Gavin W. G. and Davison, Andrew J. (2011) High-resolution human cytomegalovirus transcriptome. Proceedings of the National Academy of Sciences of the United States of America, 108 (49). pp. 19755-19760. ISSN 0027-8424

Botner, Anette and Capua, Ilaria and Gatherer, Derek and Katz, Jackie and Lemay, Philippe and Lopez, Vicente and Monne, Isabella and Mumford, Elizabeth and Nicoll, Angus and Salman, Mo and Sharp, Mike and Stegeman, Jan Arend and Have, Per and Correia, Sandra (2011) EFSA Panel on Animal Health and Welfare (AHAW); Scientific Opinion on monitoring for the emergence of possible new pandemic strains of influenza in animals: EFSA-Q-2009-00983. EFSA Journal (2109). ISSN 1831-4732

Gatherer, Derek (2010) Tempo and mode in the molecular evolution of influenza C. PLoS Currents, 2: RRN1199.

Gatherer, Derek (2010) The Little Ice Age and the emergence of influenza A. Medical Hypotheses, 75 (4). pp. 359-362. ISSN 0306-9877

Dhillon, Simrat and Witteveldt, Jeroen and Gatherer, Derek and Owsianka, Ania M. and Zeisel, Mirjam B. and Zahid, Muhammad N. and Rychłowska, Małgorzata and Foung, Steven K. H. and Baumert, Thomas F. and Angus, Allan G. N. and Patel, Arvind H. (2010) Mutations within a conserved region of the hepatitis C virus E2 glycoprotein that influence virus-receptor interactions and sensitivity to neutralizing antibodies. Journal of Virology, 84 (11). pp. 5494-5507. ISSN 0022-538X

Gatherer, Derek (2010) So what do we really mean when we say that systems biology is holistic? BMC Systems Biology, 4: 22. ISSN 1752-0509

Cunningham, Charles and Gatherer, Derek and Hilfrich, Birgitta and Baluchova, Katarina and Dargan, Derrick J. and Thomson, Marian and Griffiths, Paul D. and Wilkinson, Gavin W. G. and Schulz, Thomas F. and Davison, Andrew J. (2010) Sequences of complete human cytomegalovirus genomes from infected cell cultures and clinical specimens. Journal of General Virology, 91 (3). pp. 605-615. ISSN 0022-1317

Ehlers, Bernhard and Spiess, Katja and Leendertz, Fabian and Peeters, Martine and Boesch, Christophe and Gatherer, Derek and McGeoch, Duncan J (2010) Lymphocryptovirus phylogeny and the origins of Epstein-Barr virus. Journal of General Virology, 91 (3). pp. 630-642. ISSN 0022-1317

Gatherer, Derek (2010) Passage in egg culture is a major cause of apparent positive selection in influenza B hemagglutinin. Journal of Medical Virology, 82 (1). pp. 123-127. ISSN 0146-6615

Alcendor, Donald J and Zong, Jianchao and Dolan, Aidan and Gatherer, Derek and Davison, Andrew J. and Hayward, Gary S. (2009) Patterns of divergence in the vCXCL and vGPCR gene clusters in primate cytomegalovirus genomes. Virology, 395 (1). pp. 21-32. ISSN 0042-6822

Gatherer, Derek (2009) On the origin of influenza A hemagglutinin. Indian Journal of Microbiology, 49 (4). pp. 352-357. ISSN 0046-8991

Bradley, Amanda J. and Lurain, Nell S. and Ghazal, Peter and Trivedi, Urmi and Cunningham, Charles and Baluchova, Katarina and Gatherer, Derek and Wilkinson, Gavin W. G. and Dargan, Derrick J. and Davison, Andrew J. (2009) High-throughput sequence analysis of variants of human cytomegalovirus strains Towne and AD169. Journal of General Virology, 90 (10). pp. 2375-2380. ISSN 0022-1317

Leendertz, Fabian H. and Deckers, Merlin and Schempp, Werner and Lankester, Felix and Boesch, Christophe and Mugisha, Lawrence and Dolan, Aidan and Gatherer, Derek and McGeoch, Duncan J. and Ehlers, Bernhard (2009) Novel cytomegaloviruses in free-ranging and captive great apes : phylogenetic evidence for bidirectional horizontal transmission. Journal of General Virology, 90 (10). pp. 2386-2394. ISSN 0022-1317

Gatherer, Derek (2009) The 2009 H1N1 influenza outbreak in its historical context. Journal of Clinical Virology, 45 (3). pp. 174-178. ISSN 1386-6532

Jayawardane, Gamini and Russell, George C. and Thomson, Jackie and Deane, David and Cox, Helen and Gatherer, Derek and Ackermann, Mathias and Haig, David M. and Stewart, James P. (2008) A captured viral interleukin 10 gene with cellular exon structure. Journal of General Virology, 89 (10). pp. 2447-2455. ISSN 0022-1317

Bradley, Amanda J. and Kovács, Ida J. and Gatherer, Derek and Dargan, Derrick J. and Alkharsah, Khaled R. and Chan, Paul K. S. and Carman, William F. and Dedicoat, Martin and Emery, Vincent C. and Geddes, Colin C. and Gerna, Giuseppe and Ben-Ismaeil, Bassam and Kaye, Steve and McGregor, Alistair and Moss, Paul A. and Pusztai, Rozalia and Rawlinson, William D. and Scott, Gillian M. and Wilkinson, Gavin W. G. and Schulz, Thomas F. and Davison, Andrew J. (2008) Genotypic analysis of two hypervariable human cytomegalovirus genes. Journal of Medical Virology, 80 (9). pp. 1615-1623. ISSN 0146-6615

Bhella, David and Gatherer, Derek and Chaudhry, Yasmin and Pink, Rebecca and Goodfellow, Ian G. (2008) Structural insights into calicivirus attachment and uncoating. Journal of Virology, 82 (16). pp. 8051-8058. ISSN 0022-538X

Gatherer, Derek (2008) Finite Universe of Discourse : The Systems Biology of Walter Elsasser (1904-1991). The Open Biology Journal, 1. pp. 9-20. ISSN 1874-1967

Gatherer, Derek (2007) Peptide vocabulary analysis reveals ultra-conservation and homonymity in protein sequences. Bioinformatics and Biology Insights, 2007 (1). pp. 101-126.

Gatherer, Derek (2007) Genome signatures, self-organizing maps and higher order phylogenies : a parametric analysis. Evolutionary Bioinformatics, 2007 (3). pp. 211-236. ISSN 1176-9343

McGeoch, Duncan J. and Gatherer, Derek (2007) Lineage structures in the genome sequences of three Epstein-Barr virus strains. Virology, 359 (1). pp. 1-5. ISSN 0042-6822

Gatherer, Derek (2007) Less is more : the battle of Moore's law against Bremermann's limit on the field of systems biology. BMC Syst Biol, 1 (Suppl.): P53.

Gatherer, Derek (2007) Letter: TreeAdder: A Tool to Assist the Optimal Positioning of a New Leaf into an Existing Phylogenetic Tree. TOBIOIJ, 1.

Gatherer, Derek (2007) Voting in Eurovision : shared tastes or cultural epidemic? Empirical Text and Culture Research, 3. pp. 72-83. ISSN 1617-8912

Dolan, Aidan and Addison, Clare and Gatherer, Derek and Davison, Andrew J. and McGeoch, Duncan J. (2006) The genome of Epstein-Barr virus type 2 strain AG876. Virology, 350 (1). pp. 164-170. ISSN 0042-6822

Gatherer, Derek (2006) Comparison of Eurovision song contest simulation with actual results reveals shifting patterns of collusive voting alliances. Journal of Artificial Societies and Social Simulation, 9 (2). ISSN 1460-7425

Gatherer, Derek (2006) Cultural Evolution The Biological Perspective. Parallax, 12 (1). pp. 57-68. ISSN 1353-4645

Gatherer, Derek and McEwan, Neil R. (2005) Phylogenetic differences in content and intensity of periodic proteins. Journal of Molecular Evolution, 60 (4). pp. 447-461. ISSN 0022-2844

McGeoch, Duncan J. and Gatherer, Derek and Dolan, Aidan (2005) On phylogenetic relationships among major lineages of the Gammaherpesvirinae. Journal of General Virology, 86 (2). pp. 307-316. ISSN 0022-1317

McGeoch, Duncan J. and Gatherer, Derek (2005) Integrating reptilian herpesviruses into the family Herpesviridae. Journal of Virology, 79 (2). pp. 725-731. ISSN 0022-538X

Gatherer, Derek (2005) Finding a Niche for Memetics in the 21st Century. Journal of Memetics-Evolutionary Models of Information Transmission, 6. ISSN 1366-4786

Gatherer, Derek (2004) The inherent instability of memetic systems : Use of a genetic algorithm to solve a parameter optimisation problem in a memetic simulation. Journal of Memetics, 8 (2). ISSN 1366-4786

Dolan, Aidan and Cunningham, Charles and Hector, Ralph D. and Hassan-Walker, Aycan F. and Lee, Lydia and Addison, Clare and Dargan, Derrick J. and McGeoch, Duncan J. and Gatherer, Derek and Emery, Vincent C. and Griffiths, Paul D. and Sinzger, Christian and McSharry, Brian P. and Wilkinson, Gavin W. G. and Davison, Andrew J. (2004) Genetic content of wild-type human cytomegalovirus. Journal of General Virology, 85 (5). pp. 1301-1312. ISSN 0022-1317

Gatherer, Derek and McEwan, Neil R. (2003) Analysis of sequence periodicity in E-coli proteins : empirical investigation of the "duplication and divergence" theory of protein evolution. Journal of Molecular Evolution, 57 (2). pp. 149-158. ISSN 0022-2844

Garmendia-Doval, Beatriz and Gatherer, Derek (2002) Meeting Report : Engineering And Physical Sciences Research Council Network On Evolvability In Biology And Software Systems Symposium On Software Evolution And Evolutionary Computation, University of Hertfordshire, UK 7th - 8th February 2002. Journal of Memetics, 6 (2). pp. 60-63. ISSN 1366-4786

Gatherer, Derek (2002) Identifying cases of social contagion using memetic isolation : comparison of the dynamics of a multisociety simulation with an ethnographic data set. Journal of Artificial Societies and Social Simulation, 5 (4). ISSN 1460-7425

Gatherer, Derek (2002) The Spread of Irrational Behaviours by Contagion : An Agent Micro-Simulation. Journal of Memetics-Evolutionary Models of Information Transmission, 6. ISSN 1366-4786

Gatherer, Derek (2000) Modelling the effects of memetic taboos on genetic homosexuality. Journal of Memetics, 4 (2). pp. 22-40. ISSN 1366-4786

McEwan, Neil R. and Gatherer, Derek and Eschenlauer, Sylvain C. P. and McIntosh, Freda M. and Calza, Roger E. and Wallace, R. John and Newbold, C. Jamie (2000) An unusual codon usage pattern in the ciliate family Ophryoscolecidae and its implications for determining the source of cloned DNA. Anaerobe, 6 (1). pp. 21-28. ISSN 1075-9964

Gatherer, Derek (1999) A Plea for methodological Darwinism - A commentary on Rose's paper : Controversies in Meme theory. Journal of Memetics, 3 (1). pp. 67-69. ISSN 1366-4786

Gatherer, Derek (1999) Reply to the commentaries on my paper : Why the 'thought contagion' metaphor is retarding the progress of memetics. Journal of Memetics, 3 (1). pp. 56-61. ISSN 1366-4786

Gatherer, Derek (1999) The case for commentary. Journal of Memetics, 3 (1). pp. 27-29. ISSN 1366-4786

McEwan, Neil R. and Gatherer, Derek (1999) Codon indices as a predictor of gene functionality in a Frankia operon. Canadian Journal of Botany, 77 (9). pp. 1287-1292. ISSN 0008-4026

Gatherer, Derek and McEwan, Neil R. (1998) On units of selection in cultural evolution. Journal of Theoretical Biology, 192 (3). pp. 409-413. ISSN 0022-5193

Gatherer, Derek (1998) Meme pools, World 3, and Averroes's vision of immortality. Zygon, 33 (2). pp. 203-219. ISSN 0591-2385

McEwan, Catriona E. and Gatherer, Derek and McEwan, Neil R. (1998) Nitrogen-fixing aerobic bacteria have higher genomic GC content than non-fixing species within the same genus. Hereditas, 128 (2). pp. 173-178. ISSN 0018-0661

Gatherer, Derek and Manning, Francis C. R. (1998) Correlation of examination performance with lecture attendance : a comparative study of first-year biological sciences undergraduates. Biochemical Education, 26 (2). pp. 121-123. ISSN 0307-4412

McEwan, Neil R. and Gatherer, Derek (1998) The mutational-response index and codon bias in genes horn a Frankia nif operon. Theoretical and Applied Genetics, 96 (5). pp. 716-718. ISSN 0040-5752

McEwan, Neil R. and Gatherer, Derek (1998) Adaptation of standard spreadsheet software for the analysis of DNA sequences. Biotechniques, 24 (1). 131-136, 138. ISSN 0736-6205

Gatherer, Derek and McEwan, Neil R. (1997) Small regions of preferential codon usage and their effect on overall codon bias : the case of the plp gene. Biochemistry and Molecular Biology International, 43 (1). pp. 107-114. ISSN 1039-9712

Gatherer, Derek (1997) The evolution of music—A comparison of Darwinian and dialectical methods. Journal of Social and Evolutionary Systems, 20 (1). pp. 75-92. ISSN 1061-7361

Gatherer, Derek (1996) A stroll across the epigenetic landscape : bringing Waddington's ideas into molecular biology. Early Pregnancy, 2 (4). pp. 241-243. ISSN 1354-4195

Gatherer, Derek and Woodland, Hugh R. (1996) N-acetyl-cysteine causes a late re-specification of the anteroposterior axis in the Xenopus embryo. Developmental Dynamics, 205 (4). pp. 395-409. ISSN 1058-8388

Richardson, Jill C. and Gatherer, Derek and Woodland, Hugh R. (1995) Developmental effects of over-expression of normal and mutated forms of a Xenopus NF-κB homologue. Mechanisms of Development, 52 (2-3). pp. 165-177. ISSN 0925-4773

Gatherer, Derek (1993) Gene knockouts and murine development. Development, Growth and Differentiation, 35 (4). pp. 365-370. ISSN 0012-1592

Gatherer, Derek and del Pino, E. M. (1992) Somitogenesis in the marsupial frog Gastrotheca riobambae. International Journal of Developmental Biology, 36 (2). pp. 283-291. ISSN 0214-6282

Akhurst, Rosemary J. and Fitzpatrick, David R. and Fowlis, Deborah J. and Gatherer, Derek and Millan, Fergus A. and Slager, Hans (1992) The role of TGF-βs in mammalian development and neoplasia. Molecular Reproduction and Development, 32 (2). pp. 127-135. ISSN 1040-452X

Akhurst, Rosemary J. and Lehnert, Sigrid A. and Gatherer, Derek and Duffie, Elisabeth (1990) The role of TGFβ in mouse development. Annals of the New York Academy of Sciences, 593. pp. 259-271. ISSN 0077-8923

Akhurst, Rosemary J. and FitzPatrick, David R. and Gatherer, Derek and Lehnert, Sigrd A. and Millan, Fergus A. (1990) Transforming growth factor betas in mammalian embryogenesis. Progress in Growth Factor Research, 2 (3). pp. 153-168. ISSN 0955-2235

Gatherer, Derek and Gray, F. C. and Pirrit, L. A. and Affara, N. and Connor, J. M. (1986) Assignment of the gene for dyskeratosis congenita to XQ28. Journal of Medical Genetics, 23 (5). p. 473. ISSN 0022-2593

Contribution in Book/Report/Proceedings

Gatherer, Derek (2021) BioFutures : Where futurists and biologists meet. In: Routledge Handbook of Social Futures :. Routledge, London. ISBN 9781138340336

Gatherer, Derek (2019) Modelling versus Realisation : Rival Philosophies of Computational Theory in Systems Biology. In: Rethinking Biology : Public Understandings. World Scientific Publishing Co. Pte Ltd, Singapore, pp. 33-58. ISBN 9789811207488

Gatherer, Derek and Kuijer, Lenneke and Pettersen, Ida Nilstad (2016) "By Their [Data] You Will Know Them" : Historical Reflections on Capturing Patterns in Everyday Life. In: Everyday Futures :. Institute for Social Futures, Lancaster University, Lancaster, pp. 59-64.

Jarrett, Ruth F. and Gallagher, Alice and Gatherer, Derek (2013) Molecular methods of virus detection in lymphoma. In: Lymphoma : methods and protocols. Methods in Molecular Biology . Humana Press, pp. 277-293. ISBN 978-1-62703-268-1

McGeoch, Duncan J. and Davison, Andrew J. and Dolan, Aidan and Gatherer, Derek and Sevilla-Reyes, Edgar E. (2008) Molecular Evolution of the Herpesvirales. In: Origin and Evolution of Viruses :. Elsevier Ltd, pp. 447-475. ISBN 9780123741530

Monograph

Gatherer, Derek (2020) Climate Change and Emerging Viral Diseases : the Evidence. Working Paper. OSF Preprints.

Gatherer, Derek and Johnson, Matthew and Bermingham, Rowena and others, 350 (2020) Life beyond COVID-19: What are experts concerned about? Working Paper. The Parliamentary Office of Science and Technology.

Gatherer, Derek and Bermingham, Rowena and Others, 1100 (2020) COVID-19 outbreak: What are experts concerned about? Working Paper. The Parliamentary Office of Science and Technology.

Braun, Rebecca and Curry, Andrew and Gatherer, Derek and Kyne, Karena and Spiers, Emily (2020) Three Creative Futures Methods for Imagining Life in a Post-Antibiotic World : Report on a Speculative Cross-Sector and Cross-Campus Conversation. Working Paper. Institute for Social Futures, Lancaster University, Lancaster.

Gatherer, Derek and Benko, Maria and Brandt, Curtis and Bryant, Neil and Dastjerdi, Akbar and Depledge, Daniel and Doszpoly, Andor and Gompels, Ursula and Hartley, Carol and Inoue, Naoki and Jarosinski, Keith and Kaul, Rajeev and Lacoste, Vincent and Norberg, Peter and Origgi, Francesco and Orton, Richard and Pellett, Philip and Schmid, Scott and Stewart, James and Szpara, Moriah and Trimpert, Jakob and Vaz, Paola and Waltzek, Tom and Davison, Andrew (2018) 18 new species in the family Herpesviridae. Working Paper. UNSPECIFIED.

Wilkinson, Dianna and Page, M. and Almond, Neil and Anderson, Robert and Berry, Neil and Dougall, Thomas and Efstathiou, Stacey and Hassall, Mark and Mattiuzzo, Giada and Peter, Rigsby and Rose, N. and Schepelmann, Silke and Stone, Lindsay and Minor, Philip D. and Labrosse, Beatrice and Leculier, Christophe and Pannetier, Delphine and Strecker, Thomas and Krahling, Verena and Schnierle, Barbara and Capobianchi, Maria and Castilletti, Concetta and Gatherer, Derek and Bishop, Lisa and Hartman, Katharina and Lauder, Robert and Wright, Edward and Tedder, Richard and Samuel, Dhan and Dicks, Steve and Rudge, Thomas and Simmons, Graham and Kaplan, Gerardo and Khuran, Surender and Weiss, Carol D. and Hogrefe, Wayne and Rodriguez, Nicole and Hsu, Allen and Honko, Anna N. and Bennett, Richard S. and Pettitt, Jamie and Janosko, Krisztina and Marchand, Jonathan and Postnikova, Elena and Wu, Hua and Griffiths, Anthony and Hooper, Jay W. (2016) WHO collaborative study to assess the suitability of an interim standard for antibodies to Ebola virus. Working Paper. World Health Organization, Geneva.

Thesis

Almutairi, Hatim and Gatherer, Derek and Dillon, Roderick (2022) Complete Genome Assembly, Annotation and Comparative Analysis of Six Leishmaniinae Parasites. PhD thesis, Lancaster University.

Atkinson, Kate and Gatherer, Derek and Pickup, Roger (2015) Influenza C : a pilot study investigating the prevalence in Lancaster of a neglected respiratory virus. Masters thesis, Lancaster University.

Other

Gatherer, Derek (2024) Review of: "Uncertainty and Emotion in the 1900 Sydney Plague." Philippa Nicole Barr. Cambridge: Cambridge Elements, Cambridge University Press. British Society for Literature and Science.

Gatherer, Derek (2024) Measles is the most infectious disease known to science – adults should consider getting another MMR vaccine. The Conversation.

Gatherer, Derek (2024) Some believe the 1889 Russian flu pandemic was actually caused by a coronavirus – here’s why that’s unlikely. The Conversation.

Gatherer, Derek and Deignan, Alice and Sanderson, Chris (2023) Victorian Britain had its own anti-vaxxers – and they helped bring down a government. The Conversation.