Program report:GENECOUNTING support programs

Curtis, David and Knight, Jo and Sham, Pak C. (2006) Program report:GENECOUNTING support programs. Annals of Human Genetics, 70 (Pt 2). pp. 277-279. ISSN 0003-4800

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We describe a suite of programs which enhance the usability of GENECOUNTING, a program for estimating haplotype frequencies in unrelated subjects. The programs, called RUNGC, SCANASSOC, COMPGR, SCANGROUP and LDPAIRS, carry out likelihood ratio tests and permutation tests to detect differences in haplotype frequencies between cases and controls,or between predefined groups, and output likely haplotype assignments and tables of linkage disequilibrium statistics between all pairs of markers in a dataset.

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Journal Article
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Annals of Human Genetics
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07 Jun 2016 15:14
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22 Nov 2022 03:21