A spectral phenotype of oncogenic human papillomavirus-infected exfoliative cervical cytology distinguishes women based on age

Kerns, Jemma and Cheung, Karen T. and Martin, Cara and O'Leary, John J. and Prendiville, Walter and Martin-Hirsch, Pierre L. and Martin, Francis L. (2010) A spectral phenotype of oncogenic human papillomavirus-infected exfoliative cervical cytology distinguishes women based on age. Clinica Chimica Acta, 411 (15-16). pp. 1027-1033. ISSN 1873-3492

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Abstract

BACKGROUND: Human papillomavirus (HPV) is a sexually-transmitted infection associated with cervical cancer. Of over 100 HPV types identified, 13 are high-risk oncogenic. In unvaccinated women worldwide, the incidence of cervical cancer from HPV16 and HPV18 will remain. Cervical cytology can be graded from normal (atypia-free) to low-grade to high-grade. Infrared (IR) spectroscopy is a non-destructive technique that allows the acquisition of a biochemical-cell fingerprint based on vibrational states of chemical bonds. METHODS: Exfoliative cervical cytology specimens (n=147) were retrieved, graded by a cytologist and HPV-tested/genotyped using hybrid capture 2 and the Roche HPV Linear Array. Additionally, the spectral signatures of cervical cell lines C33A, HeLa and SiHa were examined. After washing, cellular material was transferred to low-E glass slides and interrogated using attenuated total reflection Fourier-transform IR (ATR-FTIR) spectroscopy. Given the complex nature of the dataset consisting of thousands of variables (wavenumbers), we used multivariate analysis for data reduction and information retrieval. Principal component analysis coupled with linear discriminant analysis (PCA-LDA) generated a visual representation of the data (scores plot) and, identification of the wavenumbers and consequent biochemical entities responsible for segregation (loadings plot). RESULTS: Immortalised cell lines were readily distinguishable from each other. It was difficult to segregate categories of cytology associated with HPV infection types. However, in low-grade cytology infected with high-risk oncogenic HPV16 or HPV18, it was possible to segregate women based on whether they were aged 20-29years vs. 30-39years. CONCLUSIONS: Our findings suggest a spectral phenotype in exfoliative cervical cytology associated with transient vs. persistent HPV infection.

Item Type: Journal Article
Journal or Publication Title: Clinica Chimica Acta
Additional Information: Copyright 2010 Elsevier B.V. All rights reserved.
Uncontrolled Keywords: /dk/atira/pure/subjectarea/asjc/2700/2704
Subjects:
Departments: Faculty of Health and Medicine > Medicine
Faculty of Science and Technology > Lancaster Environment Centre
ID Code: 72182
Deposited By: ep_importer_pure
Deposited On: 16 Dec 2014 11:51
Refereed?: Yes
Published?: Published
Last Modified: 20 Oct 2019 04:30
URI: https://eprints.lancs.ac.uk/id/eprint/72182

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