Cuenca, Pablo Ruiz and Souza, Fabio Neves and do Nascimento, Roberta Coutinho and da Silva, Ariane Goncalves and Eyre, Max T and Santana, Juliet O and de Oliveira, Daiana Santos and de Souza, Emile Victoria Ribeiro and Palma, Fabiana Almerinda G and de Carvalho Santiago, Diogo César and Dos Santos Ribeiro, Priscyla and Read, Jonathan M and Cremonese, Cleber and Costa, Federico and Giorgi, Emanuele (2025) Using step selection functions to analyse human mobility using telemetry data in infectious disease epidemiology: a case study of leptospirosis. Other. medRxiv.
Full text not available from this repository.Abstract
Human movement plays a critical role in the transmission of infectious diseases, especially those with environmental drivers like leptospirosis-a zoonotic bacterial infection linked to mud and water contact. Using GPS loggers, we collected detailed telemetry data to understand how fine-scale movements can be analysed in the context of an infectious disease. We recruited individuals living in urban slums in Salvador, Brazil to analyse how they interact with environmental risk factors such as domestic rubbish piles, open sewers, and a local stream. We aimed to identify differences in movement patterns inside the study areas by gender, age, and leptospirosis serological status. Step-selection functions, a spatio-temporal model used in animal movement ecology, estimated selection coefficients to represent the likelihood of movement toward specific environmental factors. With 124 participants wearing GPS devices for 24 to 48 hours, recording locations every 35 seconds during active daytime hours, we segmented movements into morning, midday, afternoon, and evening. Our results suggested women moved closer to the central stream and farther from open sewers compared to men, while serologically positive individuals avoided open sewers. This study introduces a novel method for analysing human telemetry data in infectious disease research, providing critical insights for targeted interventions.