Development and application of molecular tools in the study of IncN-related plasmids from lakewater sediments

Osborn, A. Mark and Pickup, Roger W. and Saunders, Jon R. (2000) Development and application of molecular tools in the study of IncN-related plasmids from lakewater sediments. FEMS Microbiology Letters, 186 (2). pp. 203-208. ISSN 0378-1097

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Abstract

Homology to IncN, P, Q and W inc regions was investigated amongst 114 Hg2+-resistant or antibiotic-resistant bacteria isolated from lakewater sediments. No hybridisation signals were found with Inc P, Q and W probes, and only one plasmid, pLV1402, hybridised to the IncN probe. PCR primers designed to conserved regions in the replicon of the IncN plasmid pCU1 and the related beta replicon from pGSH500 were used to amplify a 978-bp fragment from pLV1402, with sequence analysis showing a close relationship (99.2% identity) between their replication genes. A 387-bp region from the pLV1402 rep gene was used to re-screen the isolates and identified another related plasmid, pLV1403. A 3.7-kb probe containing the alpha replicon from pGSH500 hybridised to both pLV1402 and pLV1403, suggesting that both are multi-replicon plasmids. The PCR primers and probes described will be useful in future studies of plasmid diversity. Copyright (C) 2000 Federation of European Microbiological Societies.

Item Type:
Journal Article
Journal or Publication Title:
FEMS Microbiology Letters
Uncontrolled Keywords:
/dk/atira/pure/subjectarea/asjc/1300/1311
Subjects:
?? INCNPCRPGSH500PLASMIDREPLICON PROBINGMICROBIOLOGYMOLECULAR BIOLOGYGENETICS ??
ID Code:
208873
Deposited By:
Deposited On:
01 Nov 2023 14:20
Refereed?:
Yes
Published?:
Published
Last Modified:
01 Nov 2023 14:20