LGAAP:Leishmaniinae Genome Assembly and Annotation Pipeline

Almutairi, Hatim and Urbaniak, Michael D and Bates, Michelle D and Jariyapan, Narissara and Kwakye-Nuako, Godwin and Thomaz-Soccol, Vanete and Al-Salem, Waleed S and Dillon, Rod J and Bates, Paul A and Gatherer, Derek (2021) LGAAP:Leishmaniinae Genome Assembly and Annotation Pipeline. Microbiology Resource Announcements, 10 (29). ISSN 2576-098X

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Abstract

We present the LGAAP computational pipeline, which was successfully used to assemble six genomes of the parasite subfamily Leishmaniinae to chromosome-scale completeness from a combination of long- and short-read sequencing data. LGAAP is open source, and we suggest that it may easily be ported for assembly of any genome of comparable size (∼35 Mb).

Item Type:
Journal Article
Journal or Publication Title:
Microbiology Resource Announcements
Subjects:
ID Code:
157574
Deposited By:
Deposited On:
26 Jul 2021 13:10
Refereed?:
Yes
Published?:
Published
Last Modified:
16 Oct 2021 04:58